Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clrn1Q8K445 AC125074.1-201ENSMUST00000227970 1331 ntBASIC7.52□□□□□ -1.2
Clrn1Q8K445 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Clrn1Q8K445 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Clrn1Q8K445 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Clrn1Q8K445 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Clrn1Q8K445 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
Clrn1Q8K445 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Clrn1Q8K445 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm28720-201ENSMUST00000190728 3156 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm25509-201ENSMUST00000116985 106 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm12310-201ENSMUST00000118013 492 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm11621-201ENSMUST00000118253 589 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm12098-201ENSMUST00000118277 508 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm15572-201ENSMUST00000119248 593 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm20396-201ENSMUST00000173358 745 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm5205-201ENSMUST00000182253 1003 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm8870-201ENSMUST00000188170 775 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm29651-201ENSMUST00000189088 697 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm29144-201ENSMUST00000189235 339 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm29238-201ENSMUST00000189709 695 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm28607-201ENSMUST00000190142 339 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm20802-201ENSMUST00000190832 698 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm28121-201ENSMUST00000191420 339 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm37751-201ENSMUST00000192440 1198 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm17530-201ENSMUST00000194336 472 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 AC163638.1-201ENSMUST00000224818 392 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm10029-201ENSMUST00000089635 330 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Gm43609-201ENSMUST00000199084 2712 ntBASIC7.52□□□□□ -1.21
Clrn1Q8K445 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clrn1Q8K445 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Clrn1Q8K445 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Gm43792-201ENSMUST00000202492 2210 ntBASIC7.51□□□□□ -1.21
Clrn1Q8K445 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.51□□□□□ -1.21
Clrn1Q8K445 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Clrn1Q8K445 Gm25232-201ENSMUST00000104502 132 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms