Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 AC124556.1-201ENSMUST00000218256 1319 ntBASIC10.27□□□□□ -0.77
Skida1Q80YR3 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Skida1Q80YR3 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Skida1Q80YR3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm6493-201ENSMUST00000159889 1786 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm37962-201ENSMUST00000195535 2034 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm42856-201ENSMUST00000200848 2852 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Kdm4a-203ENSMUST00000106403 4536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Rhoh-202ENSMUST00000201533 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm23132-201ENSMUST00000104254 132 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm14575-201ENSMUST00000117210 560 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm13013-201ENSMUST00000119087 523 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm12736-201ENSMUST00000119330 236 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm12891-201ENSMUST00000119358 240 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm12745-201ENSMUST00000121767 214 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm14162-201ENSMUST00000121985 601 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm5526-201ENSMUST00000153604 423 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm25451-201ENSMUST00000177832 121 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm27444-201ENSMUST00000184157 137 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm5254-201ENSMUST00000188353 977 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm43726-201ENSMUST00000199110 775 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm3442-201ENSMUST00000216808 710 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm9309-201ENSMUST00000223537 546 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Defa22-201ENSMUST00000098897 419 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm20705-201ENSMUST00000177278 1921 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 AC158779.2-201ENSMUST00000227902 1947 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm18640-201ENSMUST00000209777 2165 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm5310-201ENSMUST00000197861 1511 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gm7337-202ENSMUST00000181439 2655 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Tgfbi-201ENSMUST00000045173 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.26□□□□□ -0.77
Skida1Q80YR3 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Skida1Q80YR3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms