Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm14156-201ENSMUST00000121538 483 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm13828-201ENSMUST00000122278 363 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm24530-201ENSMUST00000157948 288 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Mir8095-201ENSMUST00000185103 129 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm7392-201ENSMUST00000217815 345 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm9801-201ENSMUST00000054860 408 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps54Q5SPW0 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm15251-201ENSMUST00000177947 883 ntBASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm18709-201ENSMUST00000180564 489 ntBASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm36961-201ENSMUST00000191980 132 ntBASIC9.35□□□□□ -0.91
Vps54Q5SPW0 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps54Q5SPW0 Gm37066-201ENSMUST00000192713 2061 ntBASIC9.35□□□□□ -0.91
Vps54Q5SPW0 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm38331-201ENSMUST00000195719 2671 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm12344-201ENSMUST00000117087 329 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm13988-201ENSMUST00000119363 288 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm13495-201ENSMUST00000121156 537 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm15843-201ENSMUST00000146593 529 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm22847-201ENSMUST00000157707 105 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm23117-201ENSMUST00000158482 108 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm38305-201ENSMUST00000194825 223 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm43287-201ENSMUST00000197747 600 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm43553-201ENSMUST00000200900 685 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Klra13-ps-203ENSMUST00000204367 850 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm46317-201ENSMUST00000221103 393 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms