Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Smad1P70340 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Smad1P70340 Gm17229-202ENSMUST00000166792 1753 ntBASIC8.12□□□□□ -1.11
Smad1P70340 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Smad1P70340 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Smad1P70340 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Smad1P70340 Gm9105-201ENSMUST00000120160 1398 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Smad1P70340 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Gm25273-201ENSMUST00000104295 115 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Gm26344-201ENSMUST00000104553 132 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Gm6754-201ENSMUST00000117124 913 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC8.11□□□□□ -1.11
Smad1P70340 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC8.11□□□□□ -1.11
Smad1P70340 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.11□□□□□ -1.11
Smad1P70340 Gm29145-201ENSMUST00000189914 456 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC8.11□□□□□ -1.11
Smad1P70340 Gm43743-201ENSMUST00000197898 697 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.11□□□□□ -1.11
Smad1P70340 AC151982.1-201ENSMUST00000223546 464 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Smad1P70340 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Smad1P70340 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Smad1P70340 AC170188.1-201ENSMUST00000223710 1963 ntBASIC8.11□□□□□ -1.11
Smad1P70340 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Smad1P70340 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Smad1P70340 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.1□□□□□ -1.11
Smad1P70340 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.1□□□□□ -1.11
Smad1P70340 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.1□□□□□ -1.11
Smad1P70340 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Gm25762-201ENSMUST00000103984 132 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm26014-201ENSMUST00000104405 132 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm23834-201ENSMUST00000104436 129 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm14056-201ENSMUST00000117198 642 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm12306-201ENSMUST00000117256 171 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm13750-201ENSMUST00000117621 465 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm15028-201ENSMUST00000120295 370 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8.1□□□□□ -1.11
Smad1P70340 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC8.1□□□□□ -1.11
Smad1P70340 Gm17572-201ENSMUST00000171455 420 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm29577-201ENSMUST00000186427 693 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.1□□□□□ -1.11
Smad1P70340 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC8.1□□□□□ -1.11
Smad1P70340 Gm42938-201ENSMUST00000198414 1072 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.1□□□□□ -1.11
Smad1P70340 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Smad1P70340 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC8.1□□□□□ -1.11
Smad1P70340 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Smad1P70340 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm19810-201ENSMUST00000218521 251 ntBASIC8.1□□□□□ -1.11
Smad1P70340 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.1□□□□□ -1.11
Smad1P70340 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Gm24046-201ENSMUST00000083111 165 ntBASIC8.1□□□□□ -1.11
Smad1P70340 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smad1P70340 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms