Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm16026-201ENSMUST00000094774 580 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm37142-201ENSMUST00000193718 3110 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm42656-201ENSMUST00000201506 2305 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm15578-201ENSMUST00000117320 475 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm13358-201ENSMUST00000121427 569 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm22361-201ENSMUST00000158435 176 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm17572-201ENSMUST00000171455 420 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm25735-201ENSMUST00000175164 215 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm18828-201ENSMUST00000180475 857 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm43674-201ENSMUST00000196313 791 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm43553-201ENSMUST00000200900 685 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 AC132433.1-201ENSMUST00000221553 1101 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Zfp389-202ENSMUST00000224437 1234 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 AC126805.1-201ENSMUST00000225142 262 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Gm16410-201ENSMUST00000094550 774 ntBASIC8.91□□□□□ -0.98
Hmgb1P63158 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Hmgb1P63158 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmgb1P63158 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm37199-201ENSMUST00000193881 4065 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm6754-201ENSMUST00000117124 913 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm13682-201ENSMUST00000117524 702 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm5389-201ENSMUST00000120893 1176 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm13466-201ENSMUST00000121515 999 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm14983-201ENSMUST00000121551 323 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm12780-201ENSMUST00000122458 645 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm24004-201ENSMUST00000158460 178 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Mir7659-201ENSMUST00000184079 58 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm18301-201ENSMUST00000185261 888 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm38051-201ENSMUST00000193740 433 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms