Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm27602-201ENSMUST00000183861 111 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm28917-201ENSMUST00000187294 237 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Sox1P53783 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm37866-201ENSMUST00000191950 696 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm42593-201ENSMUST00000198469 377 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm5305-201ENSMUST00000204010 746 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm44931-201ENSMUST00000206056 545 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm46231-201ENSMUST00000220152 314 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm8607-201ENSMUST00000221864 431 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Gm9158-201ENSMUST00000222116 582 ntBASIC8.5□□□□□ -1.05
Sox1P53783 AC166574.2-201ENSMUST00000226751 381 ntBASIC8.5□□□□□ -1.05
Sox1P53783 CT025630.3-201ENSMUST00000228798 835 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Sdhaf2-201ENSMUST00000025570 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Sox1P53783 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Sox1P53783 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Sox1P53783 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
Sox1P53783 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Trpv2-202ENSMUST00000102643 2650 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC8.5□□□□□ -1.05
Sox1P53783 Tgfb1i1-204ENSMUST00000164710 3788 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 C330007P06Rik-201ENSMUST00000047486 3467 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Sox1P53783 Chat-201ENSMUST00000070125 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gm15964-201ENSMUST00000138207 2745 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Vmn2r54-201ENSMUST00000086210 2421 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Sox1P53783 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Sox1P53783 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Serpina3j-201ENSMUST00000109957 2155 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Gm5134-201ENSMUST00000099577 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gca-201ENSMUST00000028257 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Cflar-201ENSMUST00000069333 3163 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gm21129-201ENSMUST00000185932 2560 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm29258-201ENSMUST00000186842 2564 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Gm19127-201ENSMUST00000207067 2445 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Igkv4-58-201ENSMUST00000103355 292 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Sox1P53783 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Sox1P53783 Gm22438-201ENSMUST00000104049 132 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gm24781-201ENSMUST00000157636 117 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm3008-201ENSMUST00000160566 571 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Sox1P53783 Gm7651-201ENSMUST00000173398 901 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.49□□□□□ -1.05
Sox1P53783 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gm28142-201ENSMUST00000186899 698 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm29383-201ENSMUST00000188284 480 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.49□□□□□ -1.05
Sox1P53783 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC8.49□□□□□ -1.05
Sox1P53783 Gm43008-201ENSMUST00000202346 286 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 AC167192.4-201ENSMUST00000224087 993 ntBASIC8.49□□□□□ -1.05
Sox1P53783 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.49□□□□□ -1.05
Sox1P53783 AC080021.1-201ENSMUST00000228104 700 ntBASIC8.49□□□□□ -1.05
Sox1P53783 AC164295.2-201ENSMUST00000228539 757 ntBASIC8.49□□□□□ -1.05
Sox1P53783 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
Sox1P53783 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Sox1P53783 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Sox1P53783 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sox1P53783 Gm20712-201ENSMUST00000176387 1491 ntBASIC8.49□□□□□ -1.05
Sox1P53783 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms