Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm28064-201ENSMUST00000185639 858 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm5621-201ENSMUST00000187303 640 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm20936-201ENSMUST00000191049 658 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm30932-201ENSMUST00000191893 274 ntTSL 3 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm38063-201ENSMUST00000193990 342 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm43840-201ENSMUST00000199444 484 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm7238-201ENSMUST00000206467 973 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm7997-201ENSMUST00000210546 980 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm19612-201ENSMUST00000218279 982 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm19688-201ENSMUST00000218652 424 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC6.27□□□□□ -1.41
Sdc1P18828 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 AC110236.1-201ENSMUST00000227807 527 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm10155-201ENSMUST00000084598 483 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Sdc1P18828 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.27□□□□□ -1.41
Sdc1P18828 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.27□□□□□ -1.41
Sdc1P18828 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sdc1P18828 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.27□□□□□ -1.41
Sdc1P18828 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Tmem209-201ENSMUST00000064330 1679 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Sdc1P18828 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.26□□□□□ -1.41
Sdc1P18828 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sdc1P18828 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC6.26□□□□□ -1.41
Sdc1P18828 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm13526-201ENSMUST00000117970 189 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm12955-201ENSMUST00000119689 957 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Rps10-ps4-201ENSMUST00000120308 492 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sdc1P18828 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Sdc1P18828 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm8524-201ENSMUST00000186232 379 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm36961-201ENSMUST00000191980 132 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.26□□□□□ -1.41
Sdc1P18828 Ighv1-65-201ENSMUST00000198790 349 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm18973-201ENSMUST00000205814 511 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Gm39132-201ENSMUST00000210446 429 ntTSL 3 BASIC6.26□□□□□ -1.41
Sdc1P18828 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm19640-201ENSMUST00000214849 464 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 AC154249.1-201ENSMUST00000226296 320 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 AC167019.4-201ENSMUST00000226494 1070 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sdc1P18828 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.26□□□□□ -1.41
Sdc1P18828 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sdc1P18828 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms