Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Gm42472-201ENSMUST00000201626 859 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Gm30196-201ENSMUST00000208957 160 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Gm37995-201ENSMUST00000194958 1714 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Upk3aQ9JKX8 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm26014-201ENSMUST00000104405 132 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm24071-201ENSMUST00000104520 132 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm12838-201ENSMUST00000116278 325 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm14645-201ENSMUST00000118597 417 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm12959-201ENSMUST00000119396 403 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm13224-201ENSMUST00000119586 94 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm14749-201ENSMUST00000121269 333 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm15730-201ENSMUST00000121828 415 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm4246-201ENSMUST00000172822 216 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm43815-201ENSMUST00000197676 990 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm40319-201ENSMUST00000199785 481 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 AC160112.1-201ENSMUST00000219139 714 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm18243-201ENSMUST00000220756 887 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 AC124675.1-201ENSMUST00000226263 1390 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Upk3aQ9JKX8 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Upk3aQ9JKX8 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.52□□□□□ -1.2
Upk3aQ9JKX8 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.2
Upk3aQ9JKX8 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Upk3aQ9JKX8 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms