Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm11383-201ENSMUST00000121346 807 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm17129-201ENSMUST00000168168 505 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm20690-201ENSMUST00000177341 315 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm18301-201ENSMUST00000185261 888 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm19148-201ENSMUST00000197045 429 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm18973-201ENSMUST00000205814 511 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm4536-201ENSMUST00000209157 542 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm18024-201ENSMUST00000218516 690 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 CT030170.6-202ENSMUST00000223186 544 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 AC122533.2-201ENSMUST00000223772 545 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Gm5619-201ENSMUST00000071172 760 ntBASIC6.99□□□□□ -1.29
Scrt1Q99M85 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scrt1Q99M85 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm4451-201ENSMUST00000186000 1891 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm11558-201ENSMUST00000118454 459 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm22206-201ENSMUST00000158612 116 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Glyatl3-201ENSMUST00000166343 873 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm7502-201ENSMUST00000169235 733 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm18207-201ENSMUST00000205486 526 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 AC147044.1-201ENSMUST00000223850 552 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 AC138284.3-201ENSMUST00000217345 4663 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Gm36993-201ENSMUST00000192983 2980 ntBASIC6.98□□□□□ -1.29
Scrt1Q99M85 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scrt1Q99M85 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm43917-201ENSMUST00000191984 2360 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm43331-201ENSMUST00000197991 1689 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm25546-201ENSMUST00000103977 132 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm22152-201ENSMUST00000116966 125 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm13879-201ENSMUST00000118308 242 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm15153-201ENSMUST00000119867 274 ntBASIC6.97□□□□□ -1.29
Scrt1Q99M85 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms