Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rrp1P56183 Gm44746-201ENSMUST00000205565 1349 ntBASIC8.82□□□□□ -1
Rrp1P56183 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rrp1P56183 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm25501-201ENSMUST00000104429 132 ntBASIC8.82□□□□□ -1
Rrp1P56183 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.82□□□□□ -1
Rrp1P56183 Gm11220-201ENSMUST00000118844 475 ntBASIC8.82□□□□□ -1
Rrp1P56183 Gm2214-201ENSMUST00000121333 330 ntBASIC8.82□□□□□ -1
Rrp1P56183 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.82□□□□□ -1
Rrp1P56183 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.82□□□□□ -1
Rrp1P56183 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.82□□□□□ -1
Rrp1P56183 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.82□□□□□ -1
Rrp1P56183 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.82□□□□□ -1
Rrp1P56183 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.82□□□□□ -1
Rrp1P56183 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC8.82□□□□□ -1
Rrp1P56183 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.82□□□□□ -1
Rrp1P56183 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC8.82□□□□□ -1
Rrp1P56183 Gm6083-201ENSMUST00000075518 357 ntBASIC8.82□□□□□ -1
Rrp1P56183 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.82□□□□□ -1
Rrp1P56183 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Rrp1P56183 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.82□□□□□ -1
Rrp1P56183 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Rrp1P56183 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Rrp1P56183 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.81□□□□□ -1
Rrp1P56183 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.81□□□□□ -1
Rrp1P56183 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Rrp1P56183 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Rrp1P56183 Mir467f-201ENSMUST00000116923 120 ntBASIC8.81□□□□□ -1
Rrp1P56183 Gm12687-201ENSMUST00000119752 706 ntBASIC8.81□□□□□ -1
Rrp1P56183 Gm14528-201ENSMUST00000120615 231 ntBASIC8.81□□□□□ -1
Rrp1P56183 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.81□□□□□ -1
Rrp1P56183 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.81□□□□□ -1
Rrp1P56183 Gm10182-201ENSMUST00000178676 273 ntBASIC8.81□□□□□ -1
Rrp1P56183 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Gm43471-201ENSMUST00000197550 467 ntBASIC8.81□□□□□ -1
Rrp1P56183 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.81□□□□□ -1
Rrp1P56183 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC8.81□□□□□ -1
Rrp1P56183 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.81□□□□□ -1
Rrp1P56183 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.81□□□□□ -1
Rrp1P56183 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rrp1P56183 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rrp1P56183 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rrp1P56183 Gm26132-201ENSMUST00000083166 148 ntBASIC8.81□□□□□ -1
Rrp1P56183 Snora57-201ENSMUST00000093658 148 ntBASIC8.81□□□□□ -1
Rrp1P56183 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Rrp1P56183 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Rrp1P56183 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rrp1P56183 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.81□□□□□ -1
Rrp1P56183 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rrp1P56183 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rrp1P56183 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rrp1P56183 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rrp1P56183 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rrp1P56183 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rrp1P56183 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rrp1P56183 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rrp1P56183 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Rrp1P56183 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Rrp1P56183 Gm26012-201ENSMUST00000104411 128 ntBASIC8.8□□□□□ -1
Rrp1P56183 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rrp1P56183 Gm23840-201ENSMUST00000116950 97 ntBASIC8.8□□□□□ -1
Rrp1P56183 Defa-ps4-201ENSMUST00000118021 183 ntBASIC8.8□□□□□ -1
Rrp1P56183 Gm12692-201ENSMUST00000121092 546 ntBASIC8.8□□□□□ -1
Rrp1P56183 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.8□□□□□ -1
Rrp1P56183 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rrp1P56183 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.8□□□□□ -1
Rrp1P56183 Gm26070-201ENSMUST00000157500 137 ntBASIC8.8□□□□□ -1
Rrp1P56183 Gm25190-201ENSMUST00000176664 95 ntBASIC8.8□□□□□ -1
Rrp1P56183 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.8□□□□□ -1
Rrp1P56183 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms