Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm38359-201ENSMUST00000191884 2225 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Gm43071-201ENSMUST00000197233 2032 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cux1P53564 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
Cux1P53564 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Gm11416-201ENSMUST00000119111 863 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Gm4773-201ENSMUST00000120392 702 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC11.91□□□□□ -0.5
Cux1P53564 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cux1P53564 Gm9423-201ENSMUST00000183173 997 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Gm29144-201ENSMUST00000189235 339 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Gm29238-201ENSMUST00000189709 695 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Gm28607-201ENSMUST00000190142 339 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Gm28121-201ENSMUST00000191420 339 ntBASIC11.91□□□□□ -0.5
Cux1P53564 AC113031.6-202ENSMUST00000228468 1145 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Gm43917-201ENSMUST00000191984 2360 ntBASIC11.91□□□□□ -0.5
Cux1P53564 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 AC158686.1-201ENSMUST00000218068 2332 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC11.91□□□□□ -0.5
Cux1P53564 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 AC123705.1-201ENSMUST00000222512 2058 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cux1P53564 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cux1P53564 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Gm22231-201ENSMUST00000101027 73 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cux1P53564 Gm26321-201ENSMUST00000157740 242 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC11.91□□□□□ -0.5
Cux1P53564 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC11.91□□□□□ -0.5
Cux1P53564 Gm17833-201ENSMUST00000197629 1065 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC11.91□□□□□ -0.5
Cux1P53564 Gm45506-201ENSMUST00000211620 280 ntBASIC11.91□□□□□ -0.5
Cux1P53564 AC133598.3-204ENSMUST00000224260 767 ntBASIC11.91□□□□□ -0.5
Cux1P53564 AC108947.1-201ENSMUST00000224274 1000 ntBASIC11.91□□□□□ -0.5
Cux1P53564 CT030705.2-201ENSMUST00000225301 556 ntBASIC11.91□□□□□ -0.5
Cux1P53564 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC11.9□□□□□ -0.5
Cux1P53564 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cux1P53564 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cux1P53564 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.9□□□□□ -0.5
Cux1P53564 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Gm23437-201ENSMUST00000104036 127 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cux1P53564 Gm14531-201ENSMUST00000120845 285 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Gm16357-201ENSMUST00000144091 474 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Gm7244-201ENSMUST00000164658 455 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Gm26179-201ENSMUST00000177723 132 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Gm38226-201ENSMUST00000192207 521 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Gm36928-201ENSMUST00000192466 694 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Gm37325-201ENSMUST00000194971 694 ntBASIC11.9□□□□□ -0.5
Cux1P53564 AC151971.2-201ENSMUST00000217540 909 ntBASIC11.9□□□□□ -0.5
Cux1P53564 CT030166.4-201ENSMUST00000220640 404 ntBASIC11.9□□□□□ -0.5
Cux1P53564 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cux1P53564 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cux1P53564 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cux1P53564 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cux1P53564 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Gm37891-201ENSMUST00000195585 1326 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Gm10623-201ENSMUST00000209081 2639 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cux1P53564 Gm44895-201ENSMUST00000206670 1538 ntBASIC11.89□□□□□ -0.51
Cux1P53564 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cux1P53564 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms