Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm22530-201ENSMUST00000158820 118 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm22533-201ENSMUST00000158821 274 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm4870-201ENSMUST00000198525 1251 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm3549-201ENSMUST00000203873 794 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm44258-201ENSMUST00000204925 301 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm44561-201ENSMUST00000208869 264 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm45506-201ENSMUST00000211620 280 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm46231-201ENSMUST00000220152 314 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 AV026068-229ENSMUST00000225516 595 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm22504-201ENSMUST00000082963 139 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Mir7b-201ENSMUST00000083557 111 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm45657-201ENSMUST00000211318 1349 ntBASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col4a6B1AVK5 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Trim9-203ENSMUST00000167755 4559 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm24050-201ENSMUST00000158623 290 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm8550-201ENSMUST00000161621 653 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm7412-201ENSMUST00000191692 605 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm36928-201ENSMUST00000192466 694 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm37325-201ENSMUST00000194971 694 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm8182-201ENSMUST00000197863 769 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm42546-201ENSMUST00000201584 2592 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col4a6B1AVK5 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm16016-201ENSMUST00000120831 550 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm24155-201ENSMUST00000175259 110 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm9423-201ENSMUST00000183173 997 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm27178-201ENSMUST00000184962 340 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm44279-201ENSMUST00000205154 472 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.96□□□□□ -1.13
Col4a6B1AVK5 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col4a6B1AVK5 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms