Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Mir6934-201ENSMUST00000183965 62 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm3496-201ENSMUST00000188283 745 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm37539-201ENSMUST00000192644 235 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm18843-201ENSMUST00000194982 719 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 4930441H08Rik-201ENSMUST00000205699 501 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm7997-201ENSMUST00000210546 980 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AL603630.1-201ENSMUST00000214781 147 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC156164.1-201ENSMUST00000216958 225 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC140264.1-201ENSMUST00000220023 469 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC163621.2-201ENSMUST00000222229 682 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Arl15-202ENSMUST00000224068 1002 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC113031.2-201ENSMUST00000226132 579 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC108416.3-201ENSMUST00000226148 557 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Gm10577-201ENSMUST00000097954 399 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Klhl28-201ENSMUST00000021331 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Tex11-203ENSMUST00000113718 3278 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 CT009550.4-202ENSMUST00000227369 3076 ntBASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Ccdc162-211ENSMUST00000190522 1810 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim39Q9ESN2 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Cabyr-202ENSMUST00000115857 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 C1galt1c1-201ENSMUST00000058265 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Cd99l2-202ENSMUST00000080035 3327 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 E230016K23Rik-201ENSMUST00000125626 2139 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm26521-201ENSMUST00000181576 2215 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Recql-203ENSMUST00000111803 3389 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm5743-202ENSMUST00000212004 1647 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Snora17-201ENSMUST00000104004 132 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm10923-201ENSMUST00000105085 418 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm22032-201ENSMUST00000116946 116 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm13863-201ENSMUST00000118782 602 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm12425-201ENSMUST00000119580 363 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm14800-201ENSMUST00000122084 1272 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm11382-201ENSMUST00000140484 179 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm18588-201ENSMUST00000177308 492 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Myl1-207ENSMUST00000186202 874 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm38007-201ENSMUST00000192187 313 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm37883-201ENSMUST00000194970 725 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm37955-201ENSMUST00000195098 212 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm4754-201ENSMUST00000201337 809 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm43985-201ENSMUST00000203283 757 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Gm18820-201ENSMUST00000217424 916 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim39Q9ESN2 AC116395.1-201ENSMUST00000225480 1143 ntBASIC8.05□□□□□ -1.12
Trim39Q9ESN2 AC117656.3-204ENSMUST00000225656 859 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms