Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp44Q8C2S0 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp44Q8C2S0 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp44Q8C2S0 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm24071-201ENSMUST00000104520 132 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm12075-201ENSMUST00000117426 397 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm14824-201ENSMUST00000119421 737 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm13828-201ENSMUST00000122278 363 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm43815-201ENSMUST00000197676 990 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm23604-202ENSMUST00000198428 137 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm40319-201ENSMUST00000199785 481 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm42584-201ENSMUST00000201404 220 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm18060-201ENSMUST00000207407 564 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm18243-201ENSMUST00000220756 887 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm6823-201ENSMUST00000120791 1839 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp44Q8C2S0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm26831-201ENSMUST00000181458 1380 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm14749-201ENSMUST00000121269 333 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm28728-201ENSMUST00000189087 405 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 AC137678.1-201ENSMUST00000198370 118 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 AC140208.1-201ENSMUST00000226609 285 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Vmn1r41-204ENSMUST00000227039 985 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp44Q8C2S0 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.15□□□□□ -0.94
Usp44Q8C2S0 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Usp44Q8C2S0 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Usp44Q8C2S0 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Usp44Q8C2S0 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Usp44Q8C2S0 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Gm38147-201ENSMUST00000192397 1798 ntBASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 AC123832.1-201ENSMUST00000214120 2371 ntBASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Usp44Q8C2S0 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 136.4 ms