Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC154461.2-201ENSMUST00000225462 1980 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm42737-201ENSMUST00000201074 1755 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC122397.1-201ENSMUST00000228650 2819 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm14648-201ENSMUST00000119328 483 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm13500-201ENSMUST00000119348 824 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm12202-201ENSMUST00000121196 811 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm11440-201ENSMUST00000121509 527 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm26069-201ENSMUST00000157497 277 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm24004-201ENSMUST00000158460 178 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm23773-201ENSMUST00000158985 296 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm17157-201ENSMUST00000172397 348 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Zfp738-204ENSMUST00000175678 609 ntTSL 2 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Mir6922-201ENSMUST00000185099 66 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm37282-201ENSMUST00000191987 164 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm37665-201ENSMUST00000192353 149 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm8826-201ENSMUST00000193161 948 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm8023-201ENSMUST00000195298 903 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm43835-201ENSMUST00000195932 149 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm43535-201ENSMUST00000197846 164 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm8686-201ENSMUST00000203028 388 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm44379-201ENSMUST00000204501 164 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm44268-201ENSMUST00000204814 164 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm18645-202ENSMUST00000212222 760 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm8838-201ENSMUST00000212978 541 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm5087-204ENSMUST00000225820 645 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Tssk4-207ENSMUST00000228395 1273 ntAPPRIS P5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm9761-201ENSMUST00000075650 492 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm38336-201ENSMUST00000193040 2549 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 BC055308-201ENSMUST00000193380 2538 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Mterf4-203ENSMUST00000112944 3097 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC8.28□□□□□ -1.08
Pcdh19Q80TF3 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Gm5721-201ENSMUST00000119845 1696 ntBASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Pcdh19Q80TF3 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Pcdh19Q80TF3 AC163040.1-201ENSMUST00000222979 4288 ntBASIC8.27□□□□□ -1.09
Pcdh19Q80TF3 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Pcdh19Q80TF3 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Pcdh19Q80TF3 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms