Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm13858-201ENSMUST00000118862 671 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm13680-201ENSMUST00000119790 793 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm5920-201ENSMUST00000187390 853 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm29273-201ENSMUST00000188880 262 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm18131-201ENSMUST00000199241 449 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm33778-201ENSMUST00000216884 704 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 AC132587.1-201ENSMUST00000220562 166 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm9289-201ENSMUST00000221269 606 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Vmn1r41-204ENSMUST00000227039 985 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm5316-201ENSMUST00000050391 270 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.4□□□□□ -0.91
Vps54Q5SPW0 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm43747-201ENSMUST00000201412 1330 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm24647-201ENSMUST00000157112 113 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm24738-201ENSMUST00000158856 123 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Traj54-201ENSMUST00000165071 54 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm20813-201ENSMUST00000186646 705 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm21923-201ENSMUST00000188455 696 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm28341-201ENSMUST00000190883 472 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm7542-201ENSMUST00000201140 777 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm7151-201ENSMUST00000211511 954 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm18378-201ENSMUST00000216245 628 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 AC126939.4-201ENSMUST00000225360 743 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps54Q5SPW0 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm7803-201ENSMUST00000117176 1015 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm8644-201ENSMUST00000118619 596 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm14824-201ENSMUST00000119421 737 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Defa-ps10-201ENSMUST00000121649 171 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm6838-201ENSMUST00000172851 582 ntBASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Vps54Q5SPW0 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms