Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.85□□□□□ -0.99
Rrp1P56183 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.85□□□□□ -0.99
Rrp1P56183 AC161374.2-201ENSMUST00000223662 596 ntBASIC8.85□□□□□ -0.99
Rrp1P56183 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.85□□□□□ -0.99
Rrp1P56183 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Rrp1P56183 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Gm25129-201ENSMUST00000082651 133 ntBASIC8.85□□□□□ -0.99
Rrp1P56183 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.85□□□□□ -0.99
Rrp1P56183 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Rrp1P56183 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.85□□□□□ -0.99
Rrp1P56183 Gm45832-201ENSMUST00000212762 1443 ntBASIC8.85□□□□□ -0.99
Rrp1P56183 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Rrp1P56183 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Gm43411-201ENSMUST00000196235 1579 ntBASIC8.85□□□□□ -0.99
Rrp1P56183 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Rrp1P56183 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Rrp1P56183 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rrp1P56183 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
Rrp1P56183 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.84□□□□□ -0.99
Rrp1P56183 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Gm11922-201ENSMUST00000118967 475 ntBASIC8.84□□□□□ -0.99
Rrp1P56183 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 Gm43310-201ENSMUST00000198975 820 ntBASIC8.84□□□□□ -0.99
Rrp1P56183 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.84□□□□□ -0.99
Rrp1P56183 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rrp1P56183 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Rrp1P56183 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Rrp1P56183 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
Rrp1P56183 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rrp1P56183 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.84□□□□□ -1
Rrp1P56183 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Rrp1P56183 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.83□□□□□ -1
Rrp1P56183 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Rrp1P56183 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.83□□□□□ -1
Rrp1P56183 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.83□□□□□ -1
Rrp1P56183 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Rrp1P56183 Gm25761-201ENSMUST00000103983 128 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.83□□□□□ -1
Rrp1P56183 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC8.83□□□□□ -1
Rrp1P56183 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Gm28677-202ENSMUST00000186904 615 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rrp1P56183 Gm28193-201ENSMUST00000189863 615 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm37822-201ENSMUST00000192618 1109 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm37185-201ENSMUST00000193852 410 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.83□□□□□ -1
Rrp1P56183 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.83□□□□□ -1
Rrp1P56183 Gm4120-201ENSMUST00000220456 578 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rrp1P56183 Gm8394-201ENSMUST00000079684 952 ntBASIC8.83□□□□□ -1
Rrp1P56183 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rrp1P56183 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rrp1P56183 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rrp1P56183 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rrp1P56183 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.83□□□□□ -1
Rrp1P56183 Gm44187-201ENSMUST00000204735 1929 ntBASIC8.83□□□□□ -1
Rrp1P56183 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.83□□□□□ -1
Rrp1P56183 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rrp1P56183 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rrp1P56183 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms