Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm37094-201ENSMUST00000193352 4540 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Cdk16-202ENSMUST00000115364 3270 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm37818-201ENSMUST00000194952 3169 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Mcf2l-204ENSMUST00000110867 3864 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC8.52□□□□□ -1.04
Sox1P53783 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC8.52□□□□□ -1.04
Sox1P53783 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Sox1P53783 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Sox1P53783 Gm37307-201ENSMUST00000193663 2621 ntBASIC8.52□□□□□ -1.04
Sox1P53783 Hnrnpc-205ENSMUST00000227242 2617 ntBASIC8.52□□□□□ -1.04
Sox1P53783 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC8.52□□□□□ -1.04
Sox1P53783 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Sox1P53783 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Sox1P53783 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Sox1P53783 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Sox1P53783 Tmem175-203ENSMUST00000120327 1811 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Sox1P53783 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC8.52□□□□□ -1.05
Sox1P53783 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Sbk3-202ENSMUST00000144863 3152 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Rab5b-201ENSMUST00000000727 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 D330050G23Rik-202ENSMUST00000128305 1616 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Cpsf3-201ENSMUST00000067284 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.52□□□□□ -1.05
Sox1P53783 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm14300-201ENSMUST00000120800 946 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm11537-201ENSMUST00000124865 791 ntTSL 3 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Mir1968-201ENSMUST00000157429 68 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm26401-201ENSMUST00000158502 76 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.05
Sox1P53783 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Gm27817-201ENSMUST00000184302 233 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm29336-201ENSMUST00000186042 573 ntTSL 2 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm8282-201ENSMUST00000187559 483 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm6750-201ENSMUST00000189273 268 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm37241-201ENSMUST00000191736 523 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm37700-201ENSMUST00000192617 965 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC8.52□□□□□ -1.05
Sox1P53783 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.52□□□□□ -1.05
Sox1P53783 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm43772-201ENSMUST00000202052 379 ntBASIC8.52□□□□□ -1.05
Sox1P53783 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm45379-201ENSMUST00000211772 549 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm6667-201ENSMUST00000217169 564 ntBASIC8.52□□□□□ -1.05
Sox1P53783 AC147615.1-201ENSMUST00000218914 441 ntBASIC8.52□□□□□ -1.05
Sox1P53783 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.52□□□□□ -1.05
Sox1P53783 AC153646.1-201ENSMUST00000223229 1279 ntBASIC8.52□□□□□ -1.05
Sox1P53783 AC132833.3-201ENSMUST00000227472 866 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Sox1P53783 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Sox1P53783 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.52□□□□□ -1.05
Sox1P53783 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 Gm43162-201ENSMUST00000198292 1770 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Mlst8-202ENSMUST00000179163 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Mlst8-201ENSMUST00000070888 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Gm6733-201ENSMUST00000118302 1920 ntBASIC8.52□□□□□ -1.05
Sox1P53783 2810407A14Rik-202ENSMUST00000189929 2172 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Nnt-206ENSMUST00000223268 3339 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 AC156802.2-201ENSMUST00000225239 5740 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Gm37052-201ENSMUST00000194929 1831 ntBASIC8.52□□□□□ -1.05
Sox1P53783 Apobec3-201ENSMUST00000023054 1842 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 4933427D06Rik-204ENSMUST00000168837 2467 ntTSL 5 BASIC8.52□□□□□ -1.05
Sox1P53783 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Lypd5-201ENSMUST00000032683 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Sox1P53783 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms