Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col18a1P39061 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col18a1P39061 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col18a1P39061 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col18a1P39061 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Col18a1P39061 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col18a1P39061 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Col18a1P39061 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 Gm12573-201ENSMUST00000118158 286 ntBASIC10.21□□□□□ -0.77
Col18a1P39061 Gm4853-201ENSMUST00000119359 394 ntBASIC10.21□□□□□ -0.77
Col18a1P39061 Gm11474-201ENSMUST00000120814 277 ntBASIC10.21□□□□□ -0.77
Col18a1P39061 Gm4660-201ENSMUST00000131499 403 ntBASIC10.21□□□□□ -0.77
Col18a1P39061 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 Gm27804-201ENSMUST00000185135 119 ntBASIC10.21□□□□□ -0.77
Col18a1P39061 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Col18a1P39061 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 Itgbl1-201ENSMUST00000049681 4065 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Col18a1P39061 BC026762-201ENSMUST00000206555 2503 ntBASIC10.21□□□□□ -0.77
Col18a1P39061 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Col18a1P39061 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 AC130831.1-201ENSMUST00000224546 1474 ntBASIC10.21□□□□□ -0.78
Col18a1P39061 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm13732-201ENSMUST00000117753 535 ntBASIC10.21□□□□□ -0.78
Col18a1P39061 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm36943-201ENSMUST00000194422 282 ntBASIC10.21□□□□□ -0.78
Col18a1P39061 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 AC123917.1-201ENSMUST00000228063 1048 ntBASIC10.21□□□□□ -0.78
Col18a1P39061 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Col18a1P39061 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Col18a1P39061 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Col18a1P39061 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Col18a1P39061 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Npr3-204ENSMUST00000228489 1969 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Col18a1P39061 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col18a1P39061 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col18a1P39061 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm25395-201ENSMUST00000157343 272 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm9359-201ENSMUST00000163721 1221 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Gm8305-201ENSMUST00000180022 1195 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm28996-201ENSMUST00000190316 721 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 AC122844.1-201ENSMUST00000195971 107 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC10.2□□□□□ -0.78
Col18a1P39061 Cma2-202ENSMUST00000228263 857 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col18a1P39061 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col18a1P39061 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm7842-201ENSMUST00000217691 1379 ntBASIC10.2□□□□□ -0.78
Col18a1P39061 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Col18a1P39061 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col18a1P39061 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Col18a1P39061 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms