Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tex43-201ENSMUST00000035640 565 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sdc1P18828 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm22865-201ENSMUST00000083949 214 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sdc1P18828 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sdc1P18828 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm9436-201ENSMUST00000120949 1855 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm3742-201ENSMUST00000220907 1391 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Sdc1P18828 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm23266-201ENSMUST00000104444 134 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm12844-201ENSMUST00000119463 582 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm15937-201ENSMUST00000120727 1235 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm12517-201ENSMUST00000122082 425 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Myhas-201ENSMUST00000137662 787 ntTSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 2210408F21Rik-205ENSMUST00000138606 482 ntTSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm371-201ENSMUST00000142240 1245 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC6.29□□□□□ -1.4
Sdc1P18828 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm9476-201ENSMUST00000179109 696 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm27913-201ENSMUST00000184473 173 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm37247-201ENSMUST00000192549 730 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm2328-201ENSMUST00000193525 535 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm38051-201ENSMUST00000193740 433 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Ighv1-70-201ENSMUST00000196509 351 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm43452-201ENSMUST00000201873 991 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm30055-201ENSMUST00000203175 803 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm43934-201ENSMUST00000205095 388 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm7210-201ENSMUST00000209309 1067 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Flt3l-210ENSMUST00000211246 852 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm9204-201ENSMUST00000212641 947 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC6.29□□□□□ -1.4
Sdc1P18828 AC153962.2-201ENSMUST00000219417 550 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm6129-201ENSMUST00000220725 801 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gm46379-201ENSMUST00000222551 265 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 AC164879.1-201ENSMUST00000227904 1021 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Sdc1P18828 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sdc1P18828 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm43161-201ENSMUST00000197020 1688 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Dixdc1-206ENSMUST00000120622 1379 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.29□□□□□ -1.4
Sdc1P18828 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sdc1P18828 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sdc1P18828 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms