Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm27866-201ENSMUST00000184459 171 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm43711-201ENSMUST00000195994 373 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm18840-201ENSMUST00000204553 506 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm44487-201ENSMUST00000205145 325 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.02□□□□□ -1.29
Scrt1Q99M85 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scrt1Q99M85 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Lrrc28-201ENSMUST00000032775 1817 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC122878.1-201ENSMUST00000227716 1460 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm14201-201ENSMUST00000117627 289 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm13739-201ENSMUST00000118020 530 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm27596-201ENSMUST00000185061 83 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm28239-201ENSMUST00000190225 447 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm28266-201ENSMUST00000191410 439 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm43040-201ENSMUST00000202399 558 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm44018-201ENSMUST00000204471 407 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 BC060293-201ENSMUST00000207005 1104 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm44743-201ENSMUST00000209062 386 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm7151-201ENSMUST00000211511 954 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm18378-201ENSMUST00000216245 628 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC166358.1-201ENSMUST00000220677 105 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC153662.2-201ENSMUST00000221097 120 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC156037.2-201ENSMUST00000221284 112 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC166341.6-201ENSMUST00000221528 105 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 CT030242.1-201ENSMUST00000221945 125 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC124772.2-201ENSMUST00000222049 154 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC153663.1-201ENSMUST00000222165 120 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 CT030157.1-201ENSMUST00000222355 148 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC150661.2-201ENSMUST00000222418 105 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm18629-201ENSMUST00000222496 884 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC127242.2-201ENSMUST00000223138 148 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 AC154849.1-201ENSMUST00000224873 960 ntBASIC7.01□□□□□ -1.29
Scrt1Q99M85 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Scrt1Q99M85 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms