Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm26209-201ENSMUST00000103852 110 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm6181-201ENSMUST00000117187 264 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm12529-201ENSMUST00000119529 268 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm21965-201ENSMUST00000177770 384 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm5435-201ENSMUST00000179295 1150 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm11109-201ENSMUST00000180289 384 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Mir6934-201ENSMUST00000183965 62 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm38145-201ENSMUST00000192319 693 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm7369-201ENSMUST00000192738 936 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm8388-201ENSMUST00000193000 756 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm2939-201ENSMUST00000198496 478 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm7695-201ENSMUST00000220900 641 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 AC165157.2-201ENSMUST00000222265 367 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 AC154767.1-201ENSMUST00000224669 358 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 AC165260.2-202ENSMUST00000224998 631 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 AC121942.3-201ENSMUST00000225768 1436 ntBASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup35Q8R4R6 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 AC160550.2-202ENSMUST00000227812 1861 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm23659-201ENSMUST00000102245 110 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm11922-201ENSMUST00000118967 475 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Mir5623-201ENSMUST00000176631 70 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm24466-201ENSMUST00000179978 109 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Olfr10-201ENSMUST00000187570 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm17977-201ENSMUST00000198743 574 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm42402-201ENSMUST00000208341 1054 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm23037-201ENSMUST00000083874 324 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm37373-201ENSMUST00000194005 2812 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.32□□□□□ -1.4
Nup35Q8R4R6 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms