Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
Ccdc38Q8CDN8 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm24938-201ENSMUST00000102225 110 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm12098-201ENSMUST00000118277 508 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm13252-201ENSMUST00000119355 321 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm12773-201ENSMUST00000120134 587 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm29517-201ENSMUST00000190744 351 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm42464-201ENSMUST00000196717 417 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm8686-201ENSMUST00000203028 388 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm7482-201ENSMUST00000206446 505 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 AC163038.1-201ENSMUST00000223632 1142 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm8623-201ENSMUST00000071573 436 ntBASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccdc38Q8CDN8 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm12883-201ENSMUST00000117867 364 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm16057-201ENSMUST00000120811 759 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm2214-201ENSMUST00000121333 330 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm4868-201ENSMUST00000164138 789 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm28193-201ENSMUST00000189863 615 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.84□□□□□ -0.99
Ccdc38Q8CDN8 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms