Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm45793-201ENSMUST00000207900 1342 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC122828.2-201ENSMUST00000222511 2880 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm4451-201ENSMUST00000186000 1891 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm6798-201ENSMUST00000119961 360 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm8051-201ENSMUST00000120464 466 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm23441-201ENSMUST00000157268 127 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Mir3473c-201ENSMUST00000175262 81 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm24362-201ENSMUST00000183220 416 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm28006-201ENSMUST00000183841 122 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm8304-201ENSMUST00000185744 584 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm43108-201ENSMUST00000200525 293 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm44380-201ENSMUST00000203125 293 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm19172-201ENSMUST00000203170 1246 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm38430-201ENSMUST00000209888 1240 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC126805.1-201ENSMUST00000225142 262 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC129537.1-202ENSMUST00000226619 430 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC131033.2-201ENSMUST00000228138 1011 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC130219.2-201ENSMUST00000228765 807 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm9801-201ENSMUST00000054860 408 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm38169-201ENSMUST00000191822 2539 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 AC139350.2-201ENSMUST00000226508 2331 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm38236-201ENSMUST00000192661 3229 ntBASIC10.39□□□□□ -0.75
Nkx2-3P97334 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-3P97334 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Lig3-203ENSMUST00000092849 4560 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm25271-201ENSMUST00000157273 290 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm25372-201ENSMUST00000158161 255 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm29126-201ENSMUST00000188686 151 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm8407-201ENSMUST00000192719 427 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm44395-201ENSMUST00000197056 153 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm43012-201ENSMUST00000198569 937 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm40319-201ENSMUST00000199785 481 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 CT009556.3-201ENSMUST00000226173 513 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 AC134864.1-201ENSMUST00000226326 511 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 AC165154.2-201ENSMUST00000227310 336 ntBASIC10.38□□□□□ -0.75
Nkx2-3P97334 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-3P97334 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms