Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.54□□□□□ -1.04
Sox1P53783 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC8.54□□□□□ -1.04
Sox1P53783 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.54□□□□□ -1.04
Sox1P53783 AC124569.4-201ENSMUST00000223830 1220 ntBASIC8.54□□□□□ -1.04
Sox1P53783 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.54□□□□□ -1.04
Sox1P53783 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm22581-201ENSMUST00000083735 136 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Sox1P53783 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Kctd19-201ENSMUST00000063071 3048 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Drosha-207ENSMUST00000169061 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Gm38910-201ENSMUST00000204630 2448 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm42608-201ENSMUST00000197563 2018 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Zfp469-202ENSMUST00000187142 3082 ntBASIC8.54□□□□□ -1.04
Sox1P53783 AC154314.1-201ENSMUST00000223995 2996 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Gm42633-201ENSMUST00000198853 2764 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC8.54□□□□□ -1.04
Sox1P53783 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Asph-208ENSMUST00000108334 2685 ntTSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Sox1P53783 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Spire1-207ENSMUST00000224799 2059 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Dlg3-203ENSMUST00000113735 3692 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Lcp1-202ENSMUST00000124499 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Cyp2c54-201ENSMUST00000048959 1769 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Sox1P53783 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm34424-202ENSMUST00000214104 1652 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Kctd19-202ENSMUST00000167294 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Mgl2-201ENSMUST00000041550 1586 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Cep70-209ENSMUST00000191335 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm45797-201ENSMUST00000212759 1921 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Atg12-201ENSMUST00000035648 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Ivl-201ENSMUST00000053107 1922 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm14904-201ENSMUST00000117067 335 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm14587-201ENSMUST00000121714 658 ntBASIC8.53□□□□□ -1.04
Sox1P53783 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm26269-201ENSMUST00000180144 126 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm38184-201ENSMUST00000195757 113 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gm43895-201ENSMUST00000203219 855 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.53□□□□□ -1.04
Sox1P53783 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.53□□□□□ -1.04
Sox1P53783 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.53□□□□□ -1.04
Sox1P53783 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.53□□□□□ -1.04
Sox1P53783 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.53□□□□□ -1.04
Sox1P53783 AC154419.1-201ENSMUST00000227627 272 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm25189-201ENSMUST00000083911 164 ntBASIC8.53□□□□□ -1.04
Sox1P53783 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Sox1P53783 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Rtl4-202ENSMUST00000112843 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr214-203ENSMUST00000214699 2610 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 Olfr214-204ENSMUST00000215846 2605 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 Tgm5-201ENSMUST00000028721 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC8.53□□□□□ -1.04
Sox1P53783 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Sox1P53783 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Sox1P53783 Gm20236-201ENSMUST00000193037 4540 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms