Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm8065-201ENSMUST00000164048 605 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm17711-201ENSMUST00000172028 237 ntBASIC8.42□□□□□ -1.06
Usp4P35123 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.42□□□□□ -1.06
Usp4P35123 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Gm29548-201ENSMUST00000187012 694 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm28105-201ENSMUST00000187788 694 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.42□□□□□ -1.06
Usp4P35123 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC8.42□□□□□ -1.06
Usp4P35123 Ighv8-16-201ENSMUST00000199258 294 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm42760-201ENSMUST00000199814 311 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Gm45074-201ENSMUST00000209091 1240 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 AC159649.1-201ENSMUST00000220851 977 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.42□□□□□ -1.06
Usp4P35123 AC132247.1-201ENSMUST00000225930 585 ntBASIC8.42□□□□□ -1.06
Usp4P35123 AC124736.1-201ENSMUST00000226382 419 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Gm5590-201ENSMUST00000059110 345 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp4P35123 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
Usp4P35123 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC8.42□□□□□ -1.06
Usp4P35123 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC8.42□□□□□ -1.06
Usp4P35123 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Usp4P35123 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.42□□□□□ -1.06
Usp4P35123 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.42□□□□□ -1.06
Usp4P35123 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp4P35123 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.41□□□□□ -1.06
Usp4P35123 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Gm38110-201ENSMUST00000194594 1551 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Usp4P35123 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.41□□□□□ -1.06
Usp4P35123 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.41□□□□□ -1.06
Usp4P35123 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC8.41□□□□□ -1.06
Usp4P35123 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm12312-201ENSMUST00000120351 644 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm15220-201ENSMUST00000120730 379 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm26455-201ENSMUST00000175300 92 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm26436-201ENSMUST00000180325 132 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.41□□□□□ -1.06
Usp4P35123 Gm7863-201ENSMUST00000184700 805 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm28438-201ENSMUST00000188299 345 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm8407-201ENSMUST00000192719 427 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm37005-201ENSMUST00000193281 1164 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm19175-201ENSMUST00000199895 916 ntBASIC8.41□□□□□ -1.06
Usp4P35123 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC8.41□□□□□ -1.06
Usp4P35123 Gm44845-201ENSMUST00000208773 335 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 AC211878.7-201ENSMUST00000222851 661 ntBASIC8.41□□□□□ -1.06
Usp4P35123 AC151982.1-201ENSMUST00000223546 464 ntBASIC8.41□□□□□ -1.06
Usp4P35123 AC163038.1-201ENSMUST00000223632 1142 ntBASIC8.41□□□□□ -1.06
Usp4P35123 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.41□□□□□ -1.06
Usp4P35123 AC126691.2-201ENSMUST00000226185 249 ntBASIC8.41□□□□□ -1.06
Usp4P35123 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp4P35123 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp4P35123 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Usp4P35123 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Usp4P35123 Gm5721-201ENSMUST00000119845 1696 ntBASIC8.4□□□□□ -1.06
Usp4P35123 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp4P35123 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms