Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.81□□□□□ -1.32
Cd28P31041 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 Gm37321-201ENSMUST00000195742 1872 ntBASIC6.81□□□□□ -1.32
Cd28P31041 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.81□□□□□ -1.32
Cd28P31041 AC160550.2-202ENSMUST00000227812 1861 ntBASIC6.81□□□□□ -1.32
Cd28P31041 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Cd28P31041 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.81□□□□□ -1.32
Cd28P31041 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cd28P31041 Gm10764-202ENSMUST00000220397 2335 ntBASIC6.81□□□□□ -1.32
Cd28P31041 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cd28P31041 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Cd28P31041 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm23368-201ENSMUST00000116939 96 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm12917-201ENSMUST00000119850 639 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.8□□□□□ -1.32
Cd28P31041 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm6004-201ENSMUST00000173237 1116 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm25735-201ENSMUST00000175164 215 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm21965-201ENSMUST00000177770 384 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm11109-201ENSMUST00000180289 384 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm3116-201ENSMUST00000189440 1116 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm2649-201ENSMUST00000218825 610 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm18783-201ENSMUST00000220465 1151 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Gm7239-201ENSMUST00000220981 860 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cd28P31041 Mir146b-201ENSMUST00000093619 109 ntBASIC6.8□□□□□ -1.32
Cd28P31041 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cd28P31041 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cd28P31041 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.79□□□□□ -1.32
Cd28P31041 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Cd28P31041 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Cd28P31041 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.79□□□□□ -1.32
Cd28P31041 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Cd28P31041 Gm26705-201ENSMUST00000180761 1457 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.79□□□□□ -1.32
Cd28P31041 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
Cd28P31041 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm46339-201ENSMUST00000222720 3539 ntBASIC6.79□□□□□ -1.32
Cd28P31041 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Cd28P31041 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC6.79□□□□□ -1.32
Cd28P31041 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm12460-201ENSMUST00000117147 357 ntBASIC6.79□□□□□ -1.32
Cd28P31041 Gm12780-201ENSMUST00000122458 645 ntBASIC6.79□□□□□ -1.32
Cd28P31041 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm371-201ENSMUST00000142240 1245 ntBASIC6.79□□□□□ -1.32
Cd28P31041 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cd28P31041 Gm17228-201ENSMUST00000165006 491 ntBASIC6.79□□□□□ -1.32
Cd28P31041 Gm4775-201ENSMUST00000169588 402 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 243.5 ms