Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.15□□□□□ -1.1
RxrbP28704 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RxrbP28704 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RxrbP28704 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.15□□□□□ -1.1
RxrbP28704 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
RxrbP28704 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.15□□□□□ -1.11
RxrbP28704 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RxrbP28704 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RxrbP28704 AC154368.2-201ENSMUST00000222334 1724 ntBASIC8.15□□□□□ -1.11
RxrbP28704 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.14□□□□□ -1.11
RxrbP28704 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Gm33543-202ENSMUST00000210336 1428 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Gm14188-201ENSMUST00000105060 168 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Gm15574-201ENSMUST00000119937 405 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Gm11307-201ENSMUST00000121088 929 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC8.14□□□□□ -1.11
RxrbP28704 Cyb5a-205ENSMUST00000163083 676 ntTSL 3 BASIC8.14□□□□□ -1.11
RxrbP28704 Gm24325-201ENSMUST00000175344 74 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC8.14□□□□□ -1.11
RxrbP28704 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Gm7863-201ENSMUST00000184700 805 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Gm35106-201ENSMUST00000192731 250 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Gm45481-201ENSMUST00000209717 877 ntBASIC8.14□□□□□ -1.11
RxrbP28704 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 D330037F02Rik-202ENSMUST00000217400 1247 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 AC153974.1-202ENSMUST00000218700 678 ntTSL 3 BASIC8.14□□□□□ -1.11
RxrbP28704 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 AC154603.2-201ENSMUST00000223896 577 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
RxrbP28704 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Snora61-201ENSMUST00000083015 130 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Cldn34b1-201ENSMUST00000096852 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Gm10581-201ENSMUST00000097986 231 ntBASIC8.14□□□□□ -1.11
RxrbP28704 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RxrbP28704 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RxrbP28704 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxrbP28704 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RxrbP28704 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RxrbP28704 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.13□□□□□ -1.11
RxrbP28704 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxrbP28704 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RxrbP28704 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxrbP28704 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxrbP28704 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxrbP28704 Gm25000-201ENSMUST00000117016 114 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Gm11649-201ENSMUST00000118214 375 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Gm15763-201ENSMUST00000120136 403 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Gm12178-201ENSMUST00000120545 330 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxrbP28704 Gm24298-201ENSMUST00000158299 60 ntBASIC8.13□□□□□ -1.11
RxrbP28704 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms