Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm8814-201ENSMUST00000119072 535 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Olfr271-ps1-201ENSMUST00000121614 952 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm15942-201ENSMUST00000136305 810 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC6.31□□□□□ -1.4
Sdc1P18828 4931406B18Rik-202ENSMUST00000163474 726 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm4775-201ENSMUST00000169588 402 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Mir5114-201ENSMUST00000175574 61 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm23945-201ENSMUST00000179609 92 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm6723-201ENSMUST00000180449 441 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm27651-201ENSMUST00000183465 246 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm27435-201ENSMUST00000183588 88 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm18699-201ENSMUST00000190713 243 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm29068-201ENSMUST00000191607 400 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Trbv9-201ENSMUST00000194494 290 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Gm23377-202ENSMUST00000196828 138 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 AC124613.1-201ENSMUST00000198711 88 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sdc1P18828 CT030646.1-201ENSMUST00000225049 980 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 AC123692.1-201ENSMUST00000227514 730 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 AC118250.2-201ENSMUST00000228890 416 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Ackr1-201ENSMUST00000038227 1153 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sdc1P18828 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sdc1P18828 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Gm43165-201ENSMUST00000200842 1635 ntBASIC6.31□□□□□ -1.4
Sdc1P18828 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sdc1P18828 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sdc1P18828 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sdc1P18828 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm44752-201ENSMUST00000207140 3305 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
Sdc1P18828 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Sdc1P18828 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sdc1P18828 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm12047-201ENSMUST00000117561 944 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.3□□□□□ -1.4
Sdc1P18828 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.3□□□□□ -1.4
Sdc1P18828 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm16228-201ENSMUST00000162286 809 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm8964-201ENSMUST00000165944 805 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm24369-201ENSMUST00000175387 96 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.3□□□□□ -1.4
Sdc1P18828 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm43555-201ENSMUST00000196588 310 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC6.3□□□□□ -1.4
Sdc1P18828 Gm7482-201ENSMUST00000206446 505 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm32842-201ENSMUST00000212653 738 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 Gm7239-201ENSMUST00000220981 860 ntBASIC6.3□□□□□ -1.4
Sdc1P18828 AC132247.1-201ENSMUST00000225930 585 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms