Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col1a1P11087 Gm45534-201ENSMUST00000211449 2339 ntBASIC9.19□□□□□ -0.94
Col1a1P11087 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col1a1P11087 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col1a1P11087 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col1a1P11087 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col1a1P11087 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Col1a1P11087 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.19□□□□□ -0.94
Col1a1P11087 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col1a1P11087 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.19□□□□□ -0.94
Col1a1P11087 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Gm15316-201ENSMUST00000121082 421 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9.18□□□□□ -0.94
Col1a1P11087 Gm7420-201ENSMUST00000162836 842 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC9.18□□□□□ -0.94
Col1a1P11087 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Col1a1P11087 Mir6908-201ENSMUST00000184056 63 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.18□□□□□ -0.94
Col1a1P11087 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Igkv4-77-201ENSMUST00000199410 352 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 AC118249.1-201ENSMUST00000224822 608 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col1a1P11087 Gm23054-201ENSMUST00000082804 162 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Col1a1P11087 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col1a1P11087 Synpo2-201ENSMUST00000051443 3719 ntBASIC9.18□□□□□ -0.94
Col1a1P11087 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col1a1P11087 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 Gm13156-201ENSMUST00000118348 321 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.17□□□□□ -0.94
Col1a1P11087 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm17833-201ENSMUST00000197629 1065 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 Gm42424-201ENSMUST00000198319 376 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col1a1P11087 AC154904.1-201ENSMUST00000219510 312 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC9.17□□□□□ -0.94
Col1a1P11087 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Col1a1P11087 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm37460-201ENSMUST00000191796 2249 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm11342-203ENSMUST00000224879 1324 ntBASIC9.17□□□□□ -0.94
Col1a1P11087 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC9.17□□□□□ -0.94
Col1a1P11087 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col1a1P11087 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Col1a1P11087 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm19801-201ENSMUST00000218231 1882 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm42981-201ENSMUST00000200184 3252 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Col1a1P11087 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms