Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm44722-201ENSMUST00000206473 436 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm42981-201ENSMUST00000200184 3252 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm11263-201ENSMUST00000121853 749 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm18848-201ENSMUST00000182069 792 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Mir6340-201ENSMUST00000183857 119 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm28266-201ENSMUST00000191410 439 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm34144-201ENSMUST00000197039 259 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm34701-201ENSMUST00000204213 849 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm44561-201ENSMUST00000208869 264 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Gm19007-201ENSMUST00000217746 874 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 AC140451.1-201ENSMUST00000227984 737 ntBASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc180J3QNE4 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm20796-201ENSMUST00000180355 5838 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm13414-201ENSMUST00000117516 727 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm15047-201ENSMUST00000118891 454 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm24050-201ENSMUST00000158623 290 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm26505-201ENSMUST00000176208 166 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm29605-201ENSMUST00000190800 292 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gm36938-201ENSMUST00000191612 2696 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC14.25□□□□□ -0.13
Ccdc180J3QNE4 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Gm8428-201ENSMUST00000159919 1784 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 AC131033.1-201ENSMUST00000228223 279 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Gm37460-201ENSMUST00000191796 2249 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Gm16072-201ENSMUST00000119574 2377 ntBASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc180J3QNE4 n-R5s172-201ENSMUST00000104508 114 ntBASIC14.23□□□□□ -0.13
Ccdc180J3QNE4 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc180J3QNE4 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc180J3QNE4 Gm15105-201ENSMUST00000117777 204 ntBASIC14.23□□□□□ -0.13
Ccdc180J3QNE4 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms