Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn8aQ9WTU3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn8aQ9WTU3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn8aQ9WTU3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn8aQ9WTU3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Gm44549-201ENSMUST00000208351 577 ntBASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn8aQ9WTU3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn8aQ9WTU3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.86■□□□□ 0.61
Scn8aQ9WTU3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn8aQ9WTU3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn8aQ9WTU3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn8aQ9WTU3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.83■□□□□ 0.61
Scn8aQ9WTU3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn8aQ9WTU3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms