Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.49■□□□□ 0.23
Nubp2Q9R061 AV356131-201ENSMUST00000206201 750 ntBASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nubp2Q9R061 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Nubp2Q9R061 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp2Q9R061 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Rarb-207ENSMUST00000225921 2756 ntBASIC16.46■□□□□ 0.23
Nubp2Q9R061 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp2Q9R061 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.46■□□□□ 0.23
Nubp2Q9R061 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.46■□□□□ 0.23
Nubp2Q9R061 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.46■□□□□ 0.23
Nubp2Q9R061 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp2Q9R061 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Gm13234-201ENSMUST00000120010 747 ntBASIC16.45■□□□□ 0.22
Nubp2Q9R061 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.45■□□□□ 0.22
Nubp2Q9R061 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Nubp2Q9R061 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 BC021767-201ENSMUST00000126387 1716 ntBASIC16.44■□□□□ 0.22
Nubp2Q9R061 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp2Q9R061 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms