Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.16■□□□□ 0.98
Nr2e3Q9QXZ7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nr2e3Q9QXZ7 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.14■□□□□ 0.98
Nr2e3Q9QXZ7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nr2e3Q9QXZ7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nr2e3Q9QXZ7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Gm6365-201ENSMUST00000054711 744 ntBASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Nr2e3Q9QXZ7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.13■□□□□ 0.97
Nr2e3Q9QXZ7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.12■□□□□ 0.97
Nr2e3Q9QXZ7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr2e3Q9QXZ7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr2e3Q9QXZ7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr2e3Q9QXZ7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms