Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh5Q9QUM7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh5Q9QUM7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Msh5Q9QUM7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Msh5Q9QUM7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 AC073947.1-201ENSMUST00000216991 649 ntBASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh5Q9QUM7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.9■□□□□ 0.62
Msh5Q9QUM7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms