Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sec61a2Q9JLR1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sec61a2Q9JLR1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sec61a2Q9JLR1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.77■□□□□ 0.27
Sec61a2Q9JLR1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sec61a2Q9JLR1 Golph3-205ENSMUST00000228671 2842 ntBASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.76■□□□□ 0.27
Sec61a2Q9JLR1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Gm5874-201ENSMUST00000096101 508 ntBASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Sec61a2Q9JLR1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a2Q9JLR1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a2Q9JLR1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Gm8495-201ENSMUST00000188740 694 ntBASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sec61a2Q9JLR1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms