Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zc3h8Q9JJ48 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.31■□□□□ 0.36
Zc3h8Q9JJ48 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zc3h8Q9JJ48 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zc3h8Q9JJ48 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Gm5408-201ENSMUST00000197998 747 ntBASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zc3h8Q9JJ48 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Gm26524-201ENSMUST00000192339 390 ntBASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Iqck-206ENSMUST00000208658 2891 ntBASIC17.27■□□□□ 0.36
Zc3h8Q9JJ48 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zc3h8Q9JJ48 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.27■□□□□ 0.35
Zc3h8Q9JJ48 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Zc3h8Q9JJ48 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zc3h8Q9JJ48 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zc3h8Q9JJ48 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Gm4968-201ENSMUST00000071458 858 ntBASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zc3h8Q9JJ48 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms