Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.06■□□□□ 0
Rhox4bQ9JI43 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rhox4bQ9JI43 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rhox4bQ9JI43 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Rhox4bQ9JI43 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rhox4bQ9JI43 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.05■□□□□ -0
Rhox4bQ9JI43 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Rhox4bQ9JI43 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rhox4bQ9JI43 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rhox4bQ9JI43 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rhox4bQ9JI43 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Rhox4bQ9JI43 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rhox4bQ9JI43 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rhox4bQ9JI43 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rhox4bQ9JI43 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.02■□□□□ -0
Rhox4bQ9JI43 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rhox4bQ9JI43 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rhox4bQ9JI43 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 AA386476-201ENSMUST00000098781 1665 ntBASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rhox4bQ9JI43 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Gm43530-201ENSMUST00000195920 274 ntBASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rhox4bQ9JI43 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15□□□□□ -0.01
Rhox4bQ9JI43 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rhox4bQ9JI43 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms