Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Smad6-203ENSMUST00000179458 273 ntBASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim39Q9ESN2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Gm43017-201ENSMUST00000198296 752 ntBASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim39Q9ESN2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim39Q9ESN2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Gm11421-201ENSMUST00000122124 294 ntBASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim39Q9ESN2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim39Q9ESN2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim39Q9ESN2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim39Q9ESN2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim39Q9ESN2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim39Q9ESN2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim39Q9ESN2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim39Q9ESN2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim39Q9ESN2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim39Q9ESN2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms