Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Mtag2-201ENSMUST00000058665 714 ntBASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-4Q9EQM3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.27■□□□□ 0.67
Nkx2-4Q9EQM3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-4Q9EQM3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-4Q9EQM3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-4Q9EQM3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-4Q9EQM3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-4Q9EQM3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Gm10517-202ENSMUST00000192970 758 ntBASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-4Q9EQM3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-4Q9EQM3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-4Q9EQM3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms