Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Gm42569-201ENSMUST00000200539 472 ntBASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.53■□□□□ 0.56
Nif3l1Q9EQ80 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nif3l1Q9EQ80 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nif3l1Q9EQ80 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Gm10849-201ENSMUST00000100397 618 ntBASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nif3l1Q9EQ80 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nif3l1Q9EQ80 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Gm6420-201ENSMUST00000193885 723 ntBASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.49■□□□□ 0.55
Nif3l1Q9EQ80 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms