Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.54■□□□□ 0.72
Cpne8Q9DC53 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Reep4-203ENSMUST00000226563 1444 ntBASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne8Q9DC53 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.52■□□□□ 0.72
Cpne8Q9DC53 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpne8Q9DC53 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne8Q9DC53 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne8Q9DC53 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne8Q9DC53 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.49■□□□□ 0.71
Cpne8Q9DC53 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne8Q9DC53 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cpne8Q9DC53 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne8Q9DC53 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Gm9988-201ENSMUST00000069786 435 ntBASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.48■□□□□ 0.71
Cpne8Q9DC53 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne8Q9DC53 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne8Q9DC53 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms