Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.7■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Rnf138rt1Q9D9M9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138rt1Q9D9M9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm26524-201ENSMUST00000192339 390 ntBASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138rt1Q9D9M9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138rt1Q9D9M9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm10602-201ENSMUST00000098239 609 ntBASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138rt1Q9D9M9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.64■□□□□ 0.74
Rnf138rt1Q9D9M9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138rt1Q9D9M9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138rt1Q9D9M9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf138rt1Q9D9M9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf138rt1Q9D9M9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.62■□□□□ 0.73
Rnf138rt1Q9D9M9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf138rt1Q9D9M9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms