Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Otud1Q9CUB6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Otud1Q9CUB6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Otud1Q9CUB6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Otud1Q9CUB6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otud1Q9CUB6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Gm12441-201ENSMUST00000121806 588 ntBASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otud1Q9CUB6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otud1Q9CUB6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Otud1Q9CUB6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Gm26524-201ENSMUST00000192339 390 ntBASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otud1Q9CUB6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otud1Q9CUB6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Otud1Q9CUB6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otud1Q9CUB6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otud1Q9CUB6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.58■□□□□ 0.4
Otud1Q9CUB6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Otud1Q9CUB6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.58■□□□□ 0.4
Otud1Q9CUB6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Otud1Q9CUB6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Otud1Q9CUB6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms