Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska1Q9CPV1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska1Q9CPV1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska1Q9CPV1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.53■□□□□ 0.4
Ska1Q9CPV1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ska1Q9CPV1 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.52■□□□□ 0.4
Ska1Q9CPV1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
Ska1Q9CPV1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Gm21956-201ENSMUST00000179946 522 ntBASIC17.51■□□□□ 0.39
Ska1Q9CPV1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ska1Q9CPV1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ska1Q9CPV1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms