Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Gm15375-201ENSMUST00000119510 849 ntBASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.52■■□□□ 1.03
Pcdh15Q99PJ1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh15Q99PJ1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh15Q99PJ1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh15Q99PJ1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh15Q99PJ1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdh15Q99PJ1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdh15Q99PJ1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Gm12382-201ENSMUST00000122005 922 ntBASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh15Q99PJ1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdh15Q99PJ1 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Gm10138-203ENSMUST00000206952 366 ntBASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh15Q99PJ1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Gm33142-201ENSMUST00000193913 867 ntBASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh15Q99PJ1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.46■■□□□ 1.03
Pcdh15Q99PJ1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh15Q99PJ1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh15Q99PJ1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh15Q99PJ1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh15Q99PJ1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdh15Q99PJ1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Gm10013-201ENSMUST00000106074 672 ntBASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh15Q99PJ1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Gm18959-201ENSMUST00000208954 655 ntBASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh15Q99PJ1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh15Q99PJ1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Ank2-226ENSMUST00000189368 339 ntBASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms