Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Gm13158-201ENSMUST00000122007 736 ntBASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col25a1Q99MQ5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.37■□□□□ 0.69
Col25a1Q99MQ5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Gm21814-202ENSMUST00000203277 873 ntBASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col25a1Q99MQ5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Gm6443-201ENSMUST00000203599 874 ntBASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col25a1Q99MQ5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col25a1Q99MQ5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col25a1Q99MQ5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col25a1Q99MQ5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col25a1Q99MQ5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col25a1Q99MQ5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col25a1Q99MQ5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col25a1Q99MQ5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms