Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf111Q99ML9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf111Q99ML9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf111Q99ML9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf111Q99ML9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf111Q99ML9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf111Q99ML9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf111Q99ML9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.04■□□□□ 0.48
Rnf111Q99ML9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf111Q99ML9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf111Q99ML9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms