Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd1Q99MH6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd1Q99MH6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkd1Q99MH6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd1Q99MH6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkd1Q99MH6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkd1Q99MH6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Nkd1Q99MH6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Nkd1Q99MH6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd1Q99MH6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.58■□□□□ 0.41
Nkd1Q99MH6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd1Q99MH6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkd1Q99MH6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nkd1Q99MH6 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Gm11421-201ENSMUST00000122124 294 ntBASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Mir7075-201ENSMUST00000184187 82 ntBASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkd1Q99MH6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Nkd1Q99MH6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkd1Q99MH6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Gm21956-201ENSMUST00000179946 522 ntBASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkd1Q99MH6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms