Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Gm20049-201ENSMUST00000219950 730 ntBASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Clcc1Q99LI2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.42■□□□□ 0.54
Clcc1Q99LI2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.42■□□□□ 0.54
Clcc1Q99LI2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcc1Q99LI2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.4■□□□□ 0.54
Clcc1Q99LI2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clcc1Q99LI2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.39■□□□□ 0.54
Clcc1Q99LI2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clcc1Q99LI2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcc1Q99LI2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Clcc1Q99LI2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcc1Q99LI2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Gm22240-201ENSMUST00000175225 82 ntBASIC18.38■□□□□ 0.53
Clcc1Q99LI2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms